Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010646.1 Corchorus capsularis cultivar CVL-1 contig10667, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23279

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1769--1805
19
1.9
19
89
10
58
27
10
21
40
1.86
6810--6852
22
2.0
21
90
4
68
27
9
13
48
1.73
12520--12599
30
2.7
30
88
0
115
18
23
21
36
1.95
13478--13513
2
18.0
2
94
0
63
0
0
47
52
1.00
16558--16618
30
2.0
30
93
0
104
22
9
24
42
1.84
22630--22657
13
2.2
13
100
0
56
92
0
0
7
0.37

Tables:   1

The End!