Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010647.1 Corchorus capsularis cultivar CVL-1 contig10668, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26342

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2597--2699
30
3.4
30
76
5
109
12
29
24
33
1.92
2595--2707
15
7.5
15
68
4
57
14
28
22
35
1.93
3933--4015
18
4.6
18
80
0
103
10
21
40
26
1.86
9269--9332
27
2.3
27
94
2
110
56
7
29
6
1.52
9528--9553
2
13.0
2
100
0
52
50
0
0
50
1.00
9683--9753
2
37.5
2
72
20
55
47
2
0
49
1.16
9683--9753
15
4.4
17
67
24
55
47
2
0
49
1.16
10139--10227
45
2.0
45
95
2
162
24
22
19
33
1.97
13723--13843
33
3.8
32
82
4
147
40
19
9
30
1.83
17810--17839
12
2.6
11
90
10
51
80
0
0
20
0.72
19031--19237
53
3.9
53
87
1
290
38
27
14
19
1.91
19192--19285
30
3.1
30
75
17
97
37
29
13
19
1.90
25805--25840
19
1.9
18
88
5
54
33
22
2
41
1.68

Tables:   1

The End!