Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010663.1 Corchorus capsularis cultivar CVL-1 contig10684, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10474

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1585--1629
21
2.1
21
83
0
54
33
8
31
26
1.87
2051--2090
21
1.9
21
94
0
71
22
25
35
17
1.95
2072--2165
33
2.8
33
87
3
127
20
39
30
9
1.84
4913--4957
13
3.5
13
90
3
74
22
13
8
55
1.65
5843--5907
32
2.0
32
100
0
130
30
21
15
32
1.94

Tables:   1

The End!