Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010670.1 Corchorus capsularis cultivar CVL-1 contig10691, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25273

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5308--5431
33
3.7
33
81
8
144
7
27
41
23
1.80
8271--8383
33
3.4
33
90
2
174
9
29
38
22
1.86
12620--12693
33
2.2
32
83
9
87
20
45
24
9
1.80
21643--21676
8
4.1
8
85
7
50
23
2
14
58
1.50
22612--22718
33
3.2
32
86
5
126
7
28
39
24
1.82
24425--24499
33
2.3
33
79
9
82
9
26
40
24
1.85

Tables:   1

The End!