Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010672.1 Corchorus capsularis cultivar CVL-1 contig10693, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17962

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
279--337
30
2.0
30
86
6
84
30
16
28
23
1.97
6044--6114
10
6.5
10
70
17
52
12
26
46
14
1.80
6054--6095
13
3.5
13
75
18
54
16
26
42
14
1.86
6066--6176
33
3.4
32
81
9
109
9
27
44
18
1.82
6043--6097
23
2.4
23
100
0
110
14
25
47
12
1.80
6089--6196
33
3.3
33
82
7
130
8
28
42
20
1.81
10779--10918
33
4.2
32
85
3
145
11
29
38
20
1.88
12884--12943
21
2.9
21
76
0
75
35
11
21
31
1.90
13919--13972
23
2.3
23
93
0
90
18
40
31
9
1.82
15959--16030
33
2.2
33
82
9
85
9
27
41
20
1.84
16171--16202
12
2.7
12
95
0
55
25
43
21
9
1.82
17208--17241
8
4.1
8
85
7
50
58
14
2
23
1.50
17320--17349
14
2.1
14
93
0
51
80
0
0
20
0.72

Tables:   1

The End!