Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010679.1 Corchorus capsularis cultivar CVL-1 contig10700, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15484

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3934--3961
3
9.3
3
100
0
56
0
32
0
67
0.91
6857--6936
40
2.2
35
81
16
99
52
10
8
28
1.64
7922--7983
27
2.4
26
86
7
92
29
41
4
24
1.75
8909--8936
2
14.0
2
100
0
56
50
0
0
50
1.00
8987--9026
2
20.0
2
85
10
55
47
5
0
47
1.24
13136--13224
42
2.1
42
95
0
160
37
26
6
29
1.82
14691--14718
6
4.7
6
100
0
56
53
14
0
32
1.41

Tables:   1

The End!