Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010681.1 Corchorus capsularis cultivar CVL-1 contig10702, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23861

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
817--846
3
10.0
3
100
0
60
66
0
0
33
0.92
3512--3576
30
2.2
28
91
5
103
49
0
9
41
1.35
3523--3574
23
2.1
26
89
10
83
50
0
7
42
1.31
3934--3974
6
7.2
6
83
10
59
65
0
0
34
0.93
3925--3975
7
7.1
7
81
16
52
64
0
1
33
1.05
3925--3985
27
2.3
27
85
5
79
63
1
3
31
1.20
4209--4238
2
15.0
2
100
0
60
50
0
0
50
1.00
5365--5511
52
2.8
50
83
8
177
44
6
15
32
1.73
7359--7403
24
1.9
23
86
13
65
33
13
13
40
1.83

Tables:   1

The End!