Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010685.1 Corchorus capsularis cultivar CVL-1 contig10706, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63644

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1192--1347
81
1.9
80
86
5
222
37
3
26
31
1.75
4391--4776
191
2.0
191
98
0
745
31
18
18
31
1.95
10749--10992
126
2.0
125
91
5
381
39
9
12
38
1.74
11080--11136
25
2.2
25
87
3
78
10
24
7
57
1.56
26258--26312
2
26.5
2
79
20
60
47
7
0
45
1.30
27984--28015
12
2.6
13
85
14
50
59
0
6
34
1.23
31900--31929
6
4.8
6
95
4
51
80
0
20
0
0.72
36050--36081
17
1.9
17
93
6
57
43
21
3
31
1.68
38937--38983
21
2.2
21
84
0
58
17
21
51
10
1.75
41293--41325
16
2.1
16
100
0
66
39
0
54
6
1.25
42978--43043
31
2.1
31
100
0
132
51
27
9
12
1.69
44750--44781
7
4.7
7
96
3
57
56
0
0
43
0.99
44716--44783
25
2.5
27
79
18
70
55
0
2
41
1.15
44749--44801
16
3.2
16
86
10
63
52
1
1
43
1.23
61186--61215
15
2.0
15
93
0
51
43
26
10
20
1.83
63606--63644
2
19.5
2
100
0
78
48
0
0
51
1.00

Tables:   1

The End!