Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010687.1 Corchorus capsularis cultivar CVL-1 contig10708, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26971

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
847--915
31
2.2
30
82
7
84
36
13
14
36
1.85
922--1265
182
1.9
183
95
0
627
32
15
15
35
1.90
3022--3047
8
3.2
8
100
0
52
65
0
11
23
1.25
4562--4608
2
23.5
2
91
0
67
44
2
4
48
1.34
11699--11744
17
2.7
17
82
0
56
28
21
17
32
1.96
22259--22313
3
18.3
3
78
14
51
67
1
27
3
1.17

Tables:   1

The End!