Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010689.1 Corchorus capsularis cultivar CVL-1 contig10710, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19124

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2752
323
8.5
324
87
2
3801
35
16
14
33
1.89
1--2752
647
4.3
648
88
2
3870
35
16
14
33
1.89
2535--2985
232
1.9
233
92
1
753
36
15
13
34
1.87
2767--4381
324
5.0
323
88
2
2329
35
16
13
33
1.89
2767--4381
649
2.5
646
87
2
2345
35
16
13
33
1.89
4376--6019
320
5.2
319
79
8
1523
36
17
13
32
1.89
6039--7819
321
5.6
320
78
9
1818
36
17
13
33
1.88
7832--7860
5
5.8
5
100
0
58
58
0
20
20
1.39
16792--16829
11
3.5
11
89
10
51
39
0
2
57
1.12

Tables:   1

The End!