Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010690.1 Corchorus capsularis cultivar CVL-1 contig10711, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76176

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25452--25510
29
2.2
27
88
11
86
38
10
5
45
1.60
26250--26302
27
2.1
26
82
10
65
37
11
1
49
1.50
27620--27667
21
2.3
21
85
7
62
68
0
0
31
0.90
27613--27667
14
3.9
14
81
9
67
67
0
0
32
0.91
38129--38331
105
1.9
105
96
0
379
34
24
9
32
1.87
47567--47682
32
3.6
32
91
0
178
17
42
26
13
1.87
47746--47856
33
3.4
32
83
12
120
12
35
39
12
1.81
49245--49338
45
2.1
45
97
0
179
42
6
14
36
1.72
63319--63378
31
2.0
31
90
3
95
18
20
15
46
1.84
68181--68217
15
2.5
15
100
0
74
18
13
16
51
1.76
70028--70054
2
13.5
2
100
0
54
51
0
0
48
1.00
72712--72775
33
1.9
33
87
6
94
14
10
26
48
1.76

Tables:   1

The End!