Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010691.1 Corchorus capsularis cultivar CVL-1 contig10712, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  123350

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4128--4165
1
38.0
1
94
0
67
97
0
0
2
0.18
6933--7002
31
2.3
31
100
0
140
17
28
31
22
1.96
10026--10122
49
2.0
49
100
0
194
43
7
18
30
1.77
10909--11377
156
3.0
155
96
1
854
33
11
8
46
1.69
15510--15539
15
2.0
15
93
0
51
23
66
6
3
1.30
39621--39662
21
2.0
21
90
0
66
30
38
19
11
1.88
42513--42584
2
35.5
2
79
18
69
44
0
8
47
1.33
53453--53605
76
2.0
76
100
0
306
34
11
15
37
1.84
53484--53643
76
2.1
74
81
9
180
38
11
12
36
1.80
74486--74707
110
2.0
111
86
5
315
39
13
19
27
1.89
74827--74852
13
2.0
13
100
0
52
38
23
15
23
1.92
93188--93229
16
2.9
15
86
10
52
19
14
21
45
1.85
116397--116429
16
2.1
16
88
5
50
0
9
6
84
0.76
116632--116665
6
5.8
6
93
6
61
35
14
0
50
1.44
116760--117069
78
4.1
78
93
3
492
37
13
0
49
1.42
118871--118905
12
2.9
12
91
0
52
11
37
22
28
1.89
123299--123347
1
49.0
1
95
0
80
0
0
4
95
0.25

Tables:   1

The End!