Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010694.1 Corchorus capsularis cultivar CVL-1 contig10715, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17173

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--3587
331
11.0
327
72
13
2105
33
15
15
35
1.90
449--2270
964
1.9
964
94
1
3208
33
15
15
35
1.89
6--3536
653
5.5
643
78
8
3273
33
15
15
35
1.90
9379--9425
16
2.9
16
83
0
58
23
0
25
51
1.49
9381--9419
20
2.0
20
89
0
60
20
0
28
51
1.48
9387--9426
4
10.0
4
88
0
53
22
0
27
50
1.50
14348--14378
15
2.1
15
93
0
53
38
19
22
19
1.93
14669--14712
23
2.0
22
82
13
54
22
9
6
61
1.50
14928--14982
3
17.7
3
92
7
92
65
0
0
34
0.93
16192--16247
24
2.3
24
78
0
67
30
10
42
16
1.82

Tables:   1

The End!