Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010695.1 Corchorus capsularis cultivar CVL-1 contig10716, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39796

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5609--5643
18
1.9
18
100
0
70
17
25
34
22
1.96
5647--5729
40
2.1
40
97
0
157
32
34
16
15
1.91
5873--5971
49
2.0
50
96
4
182
28
22
14
35
1.93
6057--6110
27
2.0
27
100
0
108
25
40
14
18
1.89
22638--22670
7
4.7
7
100
0
66
12
0
57
30
1.35
37962--38188
93
2.5
90
80
7
226
32
19
13
34
1.91
37161--39005
899
2.1
869
89
5
2804
35
18
16
29
1.93
39389--39617
93
2.5
91
80
7
223
31
20
13
34
1.91

Tables:   1

The End!