Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010696.1 Corchorus capsularis cultivar CVL-1 contig10717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77908

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9934--9967
2
17.0
2
100
0
68
50
0
0
50
1.00
13155--13258
31
3.4
31
83
0
136
30
24
24
21
1.99
19532--19643
59
2.0
55
88
11
167
23
8
17
50
1.72
24989--25039
26
2.0
26
100
0
102
31
13
19
35
1.91
48778--48826
23
2.1
23
81
7
55
22
12
16
48
1.79
53017--53047
2
15.5
2
93
0
53
48
0
3
48
1.17
58720--58772
27
2.0
27
96
0
97
13
24
3
58
1.51
59364--59397
1
34.0
1
100
0
68
0
0
0
100
0.00
61786--61817
3
10.3
3
93
6
55
0
34
0
65
0.93

Tables:   1

The End!