Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010698.1 Corchorus capsularis cultivar CVL-1 contig10719, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56313

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42--4697
321
14.4
316
74
11
2859
33
14
16
36
1.89
2332--2369
2
19.0
2
94
0
67
47
0
2
50
1.15
9597--9625
6
4.8
6
100
0
58
17
31
0
51
1.45
10103--10131
12
2.4
12
100
0
58
0
17
58
24
1.38
10731--10764
17
1.9
18
88
5
52
55
2
26
14
1.53
11812--11842
6
5.3
6
96
3
55
16
83
0
0
0.64
13553--13581
2
14.5
2
100
0
58
48
0
0
51
1.00
17987--18027
3
13.7
3
90
10
66
68
0
29
2
1.03
24099--24200
34
3.0
34
100
0
204
29
8
23
38
1.85
27331--27358
14
2.0
14
100
0
56
35
7
14
42
1.73

Tables:   1

The End!