Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010708.1 Corchorus capsularis cultivar CVL-1 contig10729, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31629

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--119
33
3.6
33
90
0
175
12
30
42
15
1.84
3648--3765
55
2.1
55
92
3
193
24
16
11
47
1.79
9357--9391
17
2.0
18
94
5
63
20
0
17
62
1.32
21044--21068
12
2.1
12
100
0
50
0
40
0
60
0.97
24439--24469
9
3.4
9
90
0
53
35
41
0
22
1.54

Tables:   1

The End!