Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010716.1 Corchorus capsularis cultivar CVL-1 contig10737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13205

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1305--1435
37
3.7
34
75
9
102
35
22
20
22
1.96
2434--2459
7
3.7
7
100
0
52
23
0
0
76
0.78
7765--7968
35
5.8
36
81
7
233
33
19
10
36
1.86
7882--7937
17
3.2
17
78
14
69
35
12
12
39
1.81
11014--11103
21
4.3
20
77
8
81
20
18
8
52
1.72
11064--11110
21
2.2
21
85
7
60
19
17
10
53
1.72
11098--11496
22
18.5
21
69
18
184
19
20
6
54
1.65
11111--11145
16
2.2
16
94
0
61
20
17
8
54
1.68
11128--11496
43
8.4
42
73
16
227
18
20
5
54
1.64
11128--11496
21
16.9
20
69
17
150
18
20
5
54
1.64
11782--11961
55
3.3
55
88
0
288
25
18
7
48
1.73
11970--12029
22
2.7
22
89
5
86
21
21
5
51
1.66

Tables:   1

The End!