Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010717.1 Corchorus capsularis cultivar CVL-1 contig10738, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8702

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1012--1077
21
2.9
23
74
19
75
40
10
10
37
1.74
2098--2166
35
2.0
35
100
0
138
21
8
26
43
1.81
5462--5551
21
4.3
20
76
8
72
20
18
7
53
1.69
5512--5558
21
2.2
21
85
7
60
19
17
10
53
1.72
5546--5944
22
18.5
22
69
17
162
19
20
6
54
1.64
5559--5593
16
2.2
16
94
0
61
20
17
8
54
1.68
5554--5896
43
7.7
46
72
16
129
18
19
6
55
1.62
5656--5893
21
11.0
21
74
16
141
18
18
6
57
1.61
5656--5899
43
5.7
42
72
15
169
18
18
6
56
1.61
5658--5918
86
3.0
84
77
11
219
18
19
5
55
1.62
6221--6365
55
2.6
55
84
2
184
24
19
7
48
1.74
6362--6421
22
2.7
22
89
5
86
21
21
5
51
1.66

Tables:   1

The End!