Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010719.1 Corchorus capsularis cultivar CVL-1 contig10740, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15112

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8467--8506
2
21.0
2
80
19
50
50
0
2
47
1.14
8467--8517
14
3.9
14
78
19
56
47
0
1
50
1.12
8457--8506
16
2.9
18
82
8
59
46
0
2
52
1.12
8686--8730
20
2.2
20
84
4
54
66
8
8
15
1.43
9461--9496
18
2.1
17
94
5
63
63
8
16
11
1.49
10092--10127
19
1.9
18
88
5
54
33
22
2
41
1.68
10696--10728
14
2.3
15
94
5
59
18
12
3
66
1.36
11156--11193
7
5.4
7
81
12
51
15
13
13
57
1.65
10550--11477
462
2.0
461
95
0
1667
19
16
16
46
1.85
12331--12431
34
2.9
35
94
2
186
21
11
17
48
1.79
14575--14653
27
2.9
27
86
0
86
16
21
24
37
1.93

Tables:   1

The End!