Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010723.1 Corchorus capsularis cultivar CVL-1 contig10744, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38374

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3809--3876
34
2.0
34
97
0
127
32
39
10
17
1.84
3886--3949
29
2.2
29
94
2
110
32
12
18
35
1.89
6316--6348
2
16.5
2
100
0
66
51
0
0
48
1.00
13912--13952
21
1.9
22
90
5
66
51
0
12
36
1.40
15387--15415
7
4.3
7
91
8
51
27
0
44
27
1.54
19148--19176
2
14.5
2
100
0
58
48
0
0
51
1.00
29590--29642
6
8.7
6
84
12
56
1
3
16
77
1.01
34231--34616
48
7.9
49
86
3
464
22
28
16
33
1.95
34231--34616
97
4.0
97
82
6
455
22
28
16
33
1.95

Tables:   1

The End!