Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010724.1 Corchorus capsularis cultivar CVL-1 contig10745, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33690

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5601--5637
7
5.3
7
96
0
65
13
40
2
43
1.58
12124--12159
10
3.6
10
92
7
56
69
0
22
8
1.15
21792--21832
1
41.0
1
95
0
73
0
2
0
97
0.17
23474--23503
2
15.0
2
100
0
60
50
0
0
50
1.00
27573--27602
2
15.0
2
100
0
60
50
0
0
50
1.00
28469--28512
22
2.0
22
100
0
88
45
4
13
36
1.64
29178--29288
35
2.9
39
67
20
108
44
8
8
39
1.64
29197--29312
37
3.2
37
67
11
105
45
6
9
37
1.64
29165--29312
74
2.0
72
97
2
278
43
8
9
38
1.67
30539--30690
74
2.1
74
93
2
261
21
29
9
40
1.84
32278--32324
15
3.1
16
75
9
53
46
6
0
46
1.28
32513--32544
2
16.0
2
93
0
55
46
3
0
50
1.17
32513--32551
14
2.8
14
92
0
60
43
5
0
51
1.24

Tables:   1

The End!