Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010731.1 Corchorus capsularis cultivar CVL-1 contig10752, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26994

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
432--656
38
6.0
38
84
7
264
49
7
17
26
1.72
422--675
114
2.2
113
80
9
268
49
7
18
25
1.72
664--750
32
2.7
32
90
3
129
55
4
19
20
1.61
995--1029
14
2.5
14
90
0
61
57
5
17
20
1.60
1119--1176
26
2.3
26
82
8
75
43
3
27
25
1.71
1225--1254
15
2.0
15
93
0
51
63
0
16
20
1.31
1225--1270
24
1.9
24
90
0
74
60
2
19
17
1.46
4155--4223
30
2.3
30
82
2
84
42
13
5
39
1.68
13832--13892
22
2.8
22
80
5
61
39
6
24
29
1.80
13971--14088
22
5.5
22
76
6
89
36
10
13
39
1.79
13985--14088
42
2.4
42
80
12
106
37
11
13
37
1.81
20670--20755
45
1.9
45
92
4
147
37
17
19
25
1.94
21065--21465
168
2.4
168
86
2
549
30
13
16
39
1.87

Tables:   1

The End!