Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010734.1 Corchorus capsularis cultivar CVL-1 contig10755, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17145

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
215--243
2
14.5
2
100
0
58
48
0
0
51
1.00
1778--1828
25
2.1
25
88
3
77
15
9
15
58
1.62
7851--8062
106
2.0
106
98
0
406
26
13
23
36
1.92
9360--9398
19
1.9
20
85
15
53
35
0
20
43
1.52
15392--15497
31
3.8
29
73
21
91
37
27
18
16
1.92
15424--15471
22
2.3
20
86
10
62
39
25
16
18
1.91
15390--15493
53
2.0
53
88
0
154
36
26
19
17
1.94
15443--15514
31
2.3
31
85
0
108
34
27
19
18
1.95

Tables:   1

The End!