Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010735.1 Corchorus capsularis cultivar CVL-1 contig10756, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20328

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
228--264
2
18.5
2
100
0
74
48
0
0
51
1.00
2891--2934
22
2.0
23
90
4
72
22
20
18
38
1.93
2899--2951
22
2.3
23
75
15
56
20
22
20
35
1.96
10960--11140
87
2.1
87
96
0
335
25
22
9
41
1.85
14604--14645
9
5.2
8
81
18
52
61
19
0
19
1.34
14598--14645
23
2.1
23
100
0
96
64
18
0
16
1.29
17173--17218
22
2.0
23
83
4
58
41
10
10
36
1.75
19825--19940
48
2.4
48
94
1
196
27
18
23
31
1.97
20021--20059
20
2.0
20
89
0
60
20
41
10
28
1.85

Tables:   1

The End!