Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010740.1 Corchorus capsularis cultivar CVL-1 contig10761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35556

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85--120
19
1.9
18
88
5
54
41
2
22
33
1.68
1894--1935
21
2.0
21
95
0
75
52
11
0
35
1.38
2930--3031
37
2.9
35
72
5
114
18
11
23
46
1.82
3719--3753
17
2.1
17
94
0
61
37
0
34
28
1.58
9105--9166
26
2.3
27
81
8
74
16
11
12
59
1.61
14628--14661
14
2.4
14
90
0
50
79
2
8
8
1.03
18170--18230
32
1.9
32
83
12
81
62
6
9
21
1.49
20372--20427
17
3.3
17
84
0
67
5
30
46
17
1.71
20587--20634
9
5.3
9
79
0
60
33
2
52
12
1.51
20607--20653
18
2.6
18
93
0
76
40
2
46
10
1.50
30731--30769
18
2.2
18
95
0
69
53
7
15
23
1.67

Tables:   1

The End!