Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010743.1 Corchorus capsularis cultivar CVL-1 contig10764, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6873

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3055--3319
107
2.5
107
90
1
408
42
8
8
40
1.67
3431--3586
72
2.2
68
85
6
197
35
11
0
51
1.43
3445--3588
70
2.0
72
81
10
188
36
11
0
51
1.39
4729--4767
6
6.5
6
82
11
53
82
0
17
0
0.68
5403--5480
38
2.1
38
100
0
156
38
23
23
15
1.92
6146--6195
20
2.5
20
80
6
57
34
2
14
50
1.54

Tables:   1

The End!