Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001075.1 Corchorus capsularis cultivar CVL-1 contig01075, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16933

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4490--4517
2
14.0
2
100
0
56
50
0
0
50
1.00
7574--7600
3
9.0
3
100
0
54
33
0
0
66
0.92
8448--8493
2
23.0
2
86
8
67
47
2
2
47
1.26
9942--9978
6
6.2
6
96
0
65
45
18
35
0
1.50
10834--10865
14
2.3
14
100
0
64
50
6
0
43
1.27
13108--13213
55
1.9
55
94
3
187
41
6
16
34
1.75

Tables:   1

The End!