Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010750.1 Corchorus capsularis cultivar CVL-1 contig10771, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14851

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3554--3596
22
1.9
23
90
4
70
34
13
4
46
1.65
7874--7916
22
1.9
23
85
4
61
34
11
6
46
1.67
13053--13282
78
3.1
72
82
9
275
33
14
21
30
1.94
13072--13299
72
3.1
72
81
9
239
33
14
21
30
1.93
13479--13543
30
2.1
31
88
2
96
27
16
4
50
1.65
13485--13551
30
2.2
31
86
5
91
31
13
4
50
1.61
13809--13970
22
7.3
22
77
10
107
33
9
18
38
1.83
14009--14130
22
5.5
22
71
10
79
35
11
18
35
1.86
14203--14422
22
9.9
22
71
12
121
41
9
12
35
1.76
14185--14423
44
5.4
44
73
10
159
41
9
12
35
1.76
14504--14570
19
3.5
19
95
2
116
43
10
19
26
1.83
14542--14851
44
7.2
44
71
13
209
40
9
14
36
1.78
14562--14723
87
1.9
87
79
7
186
41
10
13
33
1.79
14751--14820
23
3.0
23
82
0
95
37
4
17
41
1.69
14523--14851
22
15.5
22
71
14
160
40
9
15
35
1.79

Tables:   1

The End!