Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010756.1 Corchorus capsularis cultivar CVL-1 contig10777, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52865

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24292--24462
92
1.9
92
91
0
279
38
23
9
28
1.87
24889--24917
2
14.5
2
100
0
58
51
0
0
48
1.00
29120--29159
21
2.0
22
85
14
59
15
25
7
52
1.68
35212--35833
311
2.0
311
100
0
1244
35
23
18
22
1.96
38654--38713
31
1.9
31
86
0
84
31
16
3
48
1.63
38802--38845
2
22.0
2
95
0
79
50
0
2
47
1.13
39248--39273
2
13.0
2
100
0
52
50
0
0
50
1.00
40664--40755
40
2.3
40
90
0
139
53
7
19
19
1.69
43471--43502
16
2.1
15
94
5
55
37
0
3
59
1.13
52140--52219
29
2.7
30
88
3
108
28
18
12
40
1.87
52343--52437
31
3.1
32
92
6
160
40
10
15
33
1.82

Tables:   1

The End!