Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010757.1 Corchorus capsularis cultivar CVL-1 contig10778, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28642

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77--148
29
2.4
27
72
17
63
43
12
15
29
1.83
6341--6397
28
2.0
28
86
6
78
31
10
24
33
1.89
9734--9841
29
3.7
29
81
2
126
19
20
14
45
1.85
17554--17583
15
2.0
15
100
0
60
20
20
6
53
1.67
21207--21262
27
2.1
27
100
0
112
41
7
17
33
1.77

Tables:   1

The End!