Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010761.1 Corchorus capsularis cultivar CVL-1 contig10782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36301

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3013--3046
18
1.9
18
94
5
61
67
0
0
32
0.91
16211--16249
18
2.2
18
95
0
69
20
10
10
58
1.59
23687--24230
22
24.7
22
67
12
122
37
14
9
39
1.77
23818--23903
45
1.9
45
83
4
111
38
16
11
33
1.85
23955--24230
44
6.3
43
69
14
143
38
13
8
39
1.75
23973--24056
23
3.7
22
80
4
80
40
11
7
40
1.69
24218--24268
19
2.6
20
84
6
77
27
19
11
41
1.86
24376--24427
22
2.4
22
83
3
70
38
9
5
46
1.61
24445--24541
22
4.5
22
75
15
78
38
13
7
41
1.72
24485--24679
22
8.7
22
70
19
93
35
14
8
40
1.77
24799--24938
22
6.3
22
72
9
86
39
19
9
32
1.83
26003--26062
29
2.1
29
90
6
95
48
16
13
21
1.80
26015--26080
29
2.2
29
83
5
78
46
15
15
22
1.82
27767--27838
29
2.4
29
83
4
81
23
13
16
45
1.83
27785--27844
29
2.1
29
90
6
95
21
13
16
48
1.80
36155--36215
30
2.0
30
87
0
86
52
8
27
11
1.66

Tables:   1

The End!