Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010763.1 Corchorus capsularis cultivar CVL-1 contig10784, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31785

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
480--629
46
3.3
46
82
3
212
50
0
1
48
1.09
540--591
26
1.9
28
84
7
72
48
0
0
51
1.00
554--633
41
2.0
40
80
7
92
46
0
2
51
1.14
2849--3020
32
5.8
30
68
27
118
36
28
13
21
1.92
2822--3099
58
4.8
58
91
1
427
37
28
14
20
1.91
2823--3102
26
9.9
27
68
26
106
37
28
13
20
1.91
6820--6849
14
2.1
14
100
0
60
40
6
10
43
1.64
6891--6929
19
2.0
21
85
10
55
61
5
7
25
1.44
7320--7383
32
2.0
32
96
0
119
50
7
15
26
1.71
10834--10872
18
2.2
18
85
0
51
10
2
58
28
1.44
10849--10907
27
2.2
27
81
0
64
5
5
59
30
1.41
13706--13891
63
3.0
63
95
0
336
15
23
20
40
1.91
14957--14985
2
14.5
2
100
0
58
51
0
0
48
1.00
29984--30013
2
15.0
2
100
0
60
50
0
0
50
1.00
31595--31629
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!