Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010771.1 Corchorus capsularis cultivar CVL-1 contig10792, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27708

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
956--999
22
2.0
22
100
0
88
18
36
13
31
1.90
11714--11748
17
2.0
18
88
5
54
28
2
0
68
1.04
15115--15163
25
1.9
25
88
12
73
71
4
0
24
1.03
15252--15383
62
2.1
63
83
7
160
31
14
15
38
1.88
16299--16398
29
3.4
29
72
10
87
26
27
27
20
1.99
16291--16405
58
2.0
58
87
3
169
26
26
26
20
1.99
16388--16627
50
4.8
51
79
1
227
30
27
25
16
1.97
16431--16617
100
1.9
100
84
2
250
28
28
26
15
1.96
16727--17137
116
3.5
115
82
1
491
24
26
32
16
1.96
17050--17205
72
2.2
72
82
0
177
27
22
30
19
1.98
21820--21846
3
9.0
3
100
0
54
0
33
0
66
0.92
26638--26676
10
3.8
10
83
6
51
20
2
20
56
1.54

Tables:   1

The End!