Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010773.1 Corchorus capsularis cultivar CVL-1 contig10794, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87332

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8197--8253
15
3.4
15
75
25
60
43
28
7
21
1.78
10152--10803
321
2.0
320
99
0
1279
38
11
15
34
1.83
18155--18182
2
14.0
2
100
0
56
50
0
0
50
1.00
28294--28355
6
10.3
6
83
0
61
14
14
37
33
1.87
31133--31176
21
2.1
21
91
0
70
22
31
11
34
1.90
31172--31222
17
2.9
17
80
11
59
13
25
3
56
1.54
31170--31225
9
6.4
9
77
8
62
16
26
3
53
1.59
31258--31333
34
2.3
33
84
8
93
15
38
35
10
1.82
36124--36181
21
2.5
24
75
16
68
41
10
17
31
1.83
36260--36289
12
2.4
13
94
5
53
10
46
6
36
1.64
36390--36467
40
2.0
39
85
7
104
29
14
16
39
1.88
38548--38579
13
2.5
13
100
0
64
53
12
9
25
1.68
39853--39886
7
5.0
7
89
3
52
41
26
0
32
1.56
54898--54995
49
2.0
48
94
2
169
32
17
17
32
1.93
76552--76585
16
2.1
16
94
0
59
79
0
20
0
0.73
81846--82204
76
4.7
76
92
0
583
15
27
28
28
1.96

Tables:   1

The End!