Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010778.1 Corchorus capsularis cultivar CVL-1 contig10799, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20124

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1415--1443
10
2.9
10
100
0
58
27
0
0
72
0.85
1465--1557
11
7.1
14
67
22
67
33
2
7
56
1.39
1496--1563
26
2.6
26
86
9
102
33
1
10
54
1.43
1446--1563
52
2.4
51
80
9
129
33
1
9
55
1.42
1466--1557
13
7.1
13
67
22
59
33
2
7
56
1.40
1573--1631
25
2.4
25
91
5
95
40
0
23
35
1.55
9524--9641
59
2.0
57
82
9
139
35
11
10
43
1.74
9854--9917
2
30.0
2
84
12
83
45
1
4
48
1.32
20051--20113
32
2.0
32
81
12
76
60
6
19
14
1.55

Tables:   1

The End!