Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010780.1 Corchorus capsularis cultivar CVL-1 contig10801, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14022

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1393--1447
22
2.4
23
81
3
67
38
16
12
32
1.86
1486--1554
22
3.1
22
80
0
75
36
14
13
36
1.85
1551--1611
23
2.7
23
86
0
86
39
13
6
40
1.70
2046--2171
22
5.7
22
74
10
105
37
18
9
34
1.83
4043--4107
30
2.1
31
85
2
87
47
4
16
30
1.67
8296--8340
22
2.0
22
100
0
90
22
13
28
35
1.92
8395--8455
30
2.0
30
100
0
122
32
9
22
34
1.87
8580--8674
47
2.0
47
93
0
163
15
30
6
47
1.71

Tables:   1

The End!