Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010781.1 Corchorus capsularis cultivar CVL-1 contig10802, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14565

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1253--1292
21
1.9
21
89
0
62
47
15
5
32
1.66
1349--1571
122
1.8
123
92
0
376
51
11
8
29
1.67
4539--4581
16
2.7
16
96
0
77
37
0
34
27
1.57
4584--4667
42
2.0
42
100
0
168
19
11
40
28
1.87
5981--6110
64
2.0
64
92
0
215
44
4
25
25
1.73
6381--6406
13
2.0
13
100
0
52
15
0
0
84
0.62
11122--11193
36
2.0
36
88
0
108
30
25
20
23
1.99
12912--12946
2
18.0
2
94
5
63
51
0
0
48
1.00
13909--14286
22
16.9
21
67
16
113
37
14
11
36
1.82

Tables:   1

The End!