Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010786.1 Corchorus capsularis cultivar CVL-1 contig10807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68908

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4308--4690
205
1.9
202
81
3
473
29
16
12
41
1.85
14398--14432
2
17.5
2
87
0
52
51
5
0
42
1.25
15652--15680
11
2.6
11
100
0
58
44
0
17
37
1.49
30131--30161
15
2.1
15
100
0
62
32
0
32
35
1.58
44436--44478
18
2.4
17
81
11
50
55
13
13
16
1.69
50421--50445
12
2.1
12
100
0
50
44
24
8
24
1.80
50924--50979
28
2.0
28
96
0
103
26
30
14
28
1.95
51073--51107
18
1.9
18
88
0
52
60
8
28
2
1.41
53925--54270
173
2.0
174
98
0
676
37
16
17
28
1.91
54788--55117
164
2.0
164
98
1
644
34
24
13
27
1.93
57574--57607
17
2.0
17
100
0
68
11
11
11
64
1.50
59637--59664
14
2.0
14
100
0
56
28
14
21
35
1.92

Tables:   1

The End!