Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010788.1 Corchorus capsularis cultivar CVL-1 contig10809, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15761

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1602--1816
116
1.9
116
89
0
340
51
11
16
20
1.74
6208--6253
16
3.1
15
77
17
51
56
32
10
0
1.34
6225--6266
16
2.6
16
88
0
57
52
33
11
2
1.51
6421--6499
32
2.5
32
81
4
88
36
35
10
17
1.84
10457--10506
25
2.0
25
92
0
82
36
4
16
44
1.66
12199--12234
17
2.1
17
94
0
63
41
16
5
36
1.72

Tables:   1

The End!