Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010791.1 Corchorus capsularis cultivar CVL-1 contig10812, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24108

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148--198
21
2.4
21
87
6
68
35
3
1
58
1.28
152--190
19
2.1
19
85
0
51
38
5
0
56
1.22
1913--1948
15
2.4
15
95
0
63
38
19
11
30
1.86
2234--2264
2
15.5
2
93
0
53
48
0
3
48
1.17
2522--2573
6
9.5
6
76
19
60
48
0
19
32
1.49
2524--2573
16
3.2
16
91
2
84
48
0
20
32
1.50
2522--2573
10
4.9
10
75
11
50
48
0
19
32
1.49
8535--8670
67
2.0
68
95
4
249
37
7
13
41
1.73
17047--17147
42
2.4
42
91
0
157
29
13
11
44
1.80
18626--19148
48
10.7
48
77
6
401
33
16
26
23
1.95
19003--19099
50
1.9
50
85
4
133
35
18
23
22
1.96
18676--19148
194
2.4
197
81
6
498
33
16
27
23
1.96

Tables:   1

The End!