Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010794.1 Corchorus capsularis cultivar CVL-1 contig10815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6933

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4462--4504
16
2.4
18
77
22
54
6
18
9
65
1.44
4472--4504
16
2.1
16
100
0
66
6
18
12
63
1.48
4833--4995
60
2.7
59
83
3
191
36
15
17
30
1.92
5024--5223
31
6.5
31
74
10
171
27
19
18
34
1.95
5055--5196
61
2.3
60
90
1
221
29
19
16
35
1.93
5058--5219
61
2.7
61
88
4
215
27
19
17
35
1.94
6107--6152
17
2.8
16
80
6
56
58
0
0
41
0.98
6157--6231
30
2.5
31
82
6
91
29
26
16
28
1.96

Tables:   1

The End!