Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010800.1 Corchorus capsularis cultivar CVL-1 contig10821, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25328

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1578--1810
38
6.2
38
83
9
259
49
7
16
27
1.72
1612--1672
19
3.4
16
68
23
50
50
4
16
27
1.65
1849--2046
42
4.7
42
78
10
197
55
5
19
20
1.62
1963--2040
20
3.7
21
75
13
72
55
7
16
20
1.66
2103--2216
36
3.3
36
80
4
128
58
5
21
14
1.56
2920--2973
21
2.7
20
82
5
65
37
11
20
31
1.88
3095--3131
19
1.9
19
100
0
74
32
10
18
37
1.86
3232--3270
19
2.1
19
100
0
78
33
10
20
35
1.86
3058--3336
139
2.0
139
99
0
549
34
18
21
25
1.96
6712--6752
3
13.7
3
100
0
82
68
0
0
31
0.90
9506--9535
16
1.9
15
93
6
51
46
0
33
20
1.51
13594--13636
12
3.5
12
87
6
59
30
20
13
34
1.92
22225--22296
21
3.5
21
65
24
53
19
9
22
48
1.77

Tables:   1

The End!