Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010809.1 Corchorus capsularis cultivar CVL-1 contig10830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17756

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1466--1520
21
2.7
21
80
8
60
21
21
18
38
1.94
4385--4681
135
2.2
131
84
3
371
20
27
25
26
1.99
5017--5066
6
8.3
6
100
0
100
84
0
16
0
0.63
6387--6673
156
1.8
156
80
4
346
34
20
14
30
1.93
9263--9318
28
2.0
28
100
0
112
46
3
10
39
1.56
12499--12560
25
2.5
24
85
10
81
46
1
4
46
1.33
17312--17347
16
2.2
16
100
0
72
5
13
38
41
1.68

Tables:   1

The End!