Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010813.1 Corchorus capsularis cultivar CVL-1 contig10834, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24177

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
835--860
10
2.6
10
100
0
52
23
7
19
50
1.73
1430--1479
20
2.4
22
73
10
59
66
10
6
18
1.42
1402--1465
29
2.2
30
76
15
71
64
9
9
17
1.49
6417--6450
8
4.1
8
85
7
50
58
14
2
23
1.50
15011--15323
140
2.2
141
90
3
515
36
9
10
43
1.72
15784--15841
28
2.1
28
80
6
64
34
12
6
46
1.68
15812--16204
139
2.8
139
87
3
538
35
10
9
44
1.72
16382--16775
211
1.9
209
91
2
646
47
9
9
33
1.68
17531--17588
30
1.9
30
89
0
89
44
10
3
41
1.55

Tables:   1

The End!