Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010823.1 Corchorus capsularis cultivar CVL-1 contig10844, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11198

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--169
6
26.3
6
90
9
239
37
46
0
15
1.51
1--169
13
13.2
12
90
9
239
37
46
0
15
1.51
470--738
134
2.0
134
88
2
398
15
23
21
39
1.91
5815--6082
134
2.0
134
98
0
518
31
19
19
29
1.96
10792--10822
3
10.3
3
100
0
62
67
0
0
32
0.91

Tables:   1

The End!