Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010829.1 Corchorus capsularis cultivar CVL-1 contig10850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3044

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--41
17
2.1
17
94
0
61
25
0
0
74
0.82
4--28
10
2.5
10
100
0
50
16
0
0
84
0.63
63--143
15
6.0
14
67
17
55
34
2
7
55
1.41
93--149
15
4.1
15
76
17
59
33
1
10
54
1.45
93--148
26
2.2
26
83
6
69
32
1
10
55
1.45
263--306
21
2.1
21
95
0
79
29
9
43
18
1.80
1548--1581
16
2.1
16
100
0
68
11
23
17
47
1.81
2331--2535
63
3.1
65
88
5
306
14
19
15
50
1.78

Tables:   1

The End!