Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010837.1 Corchorus capsularis cultivar CVL-1 contig10858, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34530

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--46
2
23.0
2
100
0
92
50
0
0
50
1.00
3398--3432
6
5.8
6
100
0
70
0
14
68
17
1.21
5138--5429
144
2.0
144
99
0
575
26
19
23
31
1.98
22371--22411
2
20.5
2
100
0
82
48
0
0
51
1.00
28995--29019
7
3.6
7
100
0
50
16
32
12
40
1.84
29713--29739
7
3.9
7
100
0
54
25
29
14
29
1.95
31957--32018
32
1.9
32
90
0
97
35
20
9
33
1.86
33424--34519
334
3.3
332
92
1
1862
34
17
14
33
1.90

Tables:   1

The End!