Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001084.1 Corchorus capsularis cultivar CVL-1 contig01084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14981

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2612--2669
20
3.1
19
73
22
59
24
22
17
36
1.95
2663--2698
10
3.6
10
96
0
63
41
22
5
30
1.76
4309--4377
35
1.9
36
82
5
86
33
2
20
43
1.67
5771--5813
12
3.5
12
93
6
77
25
23
16
34
1.95
10797--10843
21
2.2
20
79
17
51
42
0
0
57
0.98
12182--12262
40
2.0
40
92
0
135
28
13
17
40
1.87
12261--12290
13
2.3
13
94
0
51
40
6
36
16
1.75

Tables:   1

The End!