Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010843.1 Corchorus capsularis cultivar CVL-1 contig10864, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77380

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10601--10666
30
2.2
30
97
0
123
28
10
54
6
1.58
18526--18601
31
2.5
31
91
0
125
28
27
22
21
1.99
18906--18968
31
2.0
31
100
0
126
58
19
9
12
1.61
22807--22834
14
2.0
14
100
0
56
0
14
0
85
0.59
33911--33938
14
2.0
14
100
0
56
21
35
14
28
1.92
34280--34305
13
2.0
13
100
0
52
46
7
0
46
1.31
36921--36969
25
2.0
24
84
4
62
59
20
0
20
1.38
37540--37585
16
2.9
16
78
12
58
43
34
13
8
1.74
37540--37604
31
2.1
32
85
8
89
40
35
16
7
1.78
39700--39789
45
2.0
45
84
4
119
30
22
14
33
1.93
42877--43014
71
1.9
71
91
0
222
19
15
21
43
1.87
46506--46540
2
17.5
2
100
0
70
48
0
0
51
1.00
55728--55768
2
20.5
2
94
0
55
43
0
7
48
1.30

Tables:   1

The End!